PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098044.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 407aa    MW: 46239 Da    PI: 4.3046
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098044.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.91.1e-12176254286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt++e+ +L++a  ++  + ++++l+   W+ev++k++e  ++ r+ +qC+++++ l+k+ykk+k +  +       +++yf++++
  XP_010098044.1 176 WTERETFVLLDAWGQRFIQRGKKSLRSEEWQEVAEKVSEvSKIDRTDTQCRNRLDTLKKKYKKEKLNLTS-------KWVYFKKMD 254
                     *************************************762678*********************999886.......59****997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.9E-5175242IPR009057Homeodomain-like
PfamPF138372.2E-19175254No hitNo description
PROSITE profilePS500906.481176233IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MDDTEDDARY PPNPYGVNHQ QGYESSLRQK MPGLGGSYPR PVGSQYDDED EEDDEEDEEL  60
GEEEDGNNNN NNGQSNGYAV VRKDVGDDVD DDDEDENDND DEDEDEDDDN GEQKNYNGRS  120
EGVDMERHLK KRKLKSLVSS YEFAPRIPAP SPSSAAKPSG PSPRQSFGGR NSLTDWTERE  180
TFVLLDAWGQ RFIQRGKKSL RSEEWQEVAE KVSEVSKIDR TDTQCRNRLD TLKKKYKKEK  240
LNLTSKWVYF KKMDLLLSSP QQQPGLSCGL DSGEYVFMNP GVYLNRANGL DEMRDSPANS  300
ESAEGNDDDT DGLPPKKRKS GRDNGDGNEG SSFRLIADSI HKISEIYEKI ESSKRQQMVE  360
LEKMRMDFQR DLEIQRRQIM ERAQAEIAKI RRGVDEEIDV SAENASG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098044.10.0hypothetical protein L484_026174
TrEMBLW9R6350.0W9R635_9R
STRINGVIT_09s0002g04700.t011e-149(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.18e-56Trihelix family protein